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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NUPL1, nucleoporin like 1
Sequence ID:NM_001008564
NM_014089
NM_001008565
Entrez Gene ID:9818
Ensembl ID:ENSG00000139496

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, lung, lymph node, lymphoreticular, nervous, parathyroid, placenta, pooled tissue, prostate, stomach, uncharacterized tissue, uterus
  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

 Exon Info From UCSC:
NM_001008564
NM_014089

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3504343Full LengthBC001104nucleoporin like 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008564 NP_001008564    
NM_014089 NP_054808 Q9BVL2  

Related Sequences

 
mRNAGenPeptSwissProt
BC001104 AAH01104 Q9BVL2
AB007870 BAA23706 Q9BVL2
AK123955 BAG53985 B3KW23
AK302946 BAG64103 B4DZJ1
AK303409 BAG64462 B4E0K0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NUPL1 NP_054808 M.musculus Nupl1 71844 Gene Info NP_733479 93
R.norvegicus Nupl1 245922   NP_620791 91
A.gambiae AgaP_AGAP008772 1275631   XP_314898 38
D.melanogaster Nup58 42342   NP_650821 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)