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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PIKFYVE, phosphoinositide kinase, FYVE finger containing
Sequence ID:NM_001178000
NM_015040
NM_152671
NM_001002881
RefSeqGene ID:NG_021188
Entrez Gene ID:200576
Ensembl ID:ENSG00000115020

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CORNEAL FLECK DYSTROPHY 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 209201600 - 209223469

 Exon Info From UCSC:
NM_001178000
NM_015040
NM_152671

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069221Full LengthBC172527phosphatidylinositol-3-phosphate/phosphatidylinositol 5-kinase, type III
4400828IncompleteBC017736phosphatidylinositol-3-phosphate/phosphatidylinositol 5-kinase, type III
100062990BC156451phosphatidylinositol-3-phosphate/phosphatidylinositol 5-kinase, type III

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055855  NP_689884  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001178000 NP_001171471      
NM_015040 NP_055855 Q9Y2I7 EC 2.7.1.150 Cpn60_TCP1
DEP
FYVE
PIP5K
NM_152671 NP_689884     DEP

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC032389 AAH32389 Q9Y2I7 EC 2.7.1.150
BC125052 AAI25053 Q9Y2I7 EC 2.7.1.150
BC125053 AAI25054 Q9Y2I7 EC 2.7.1.150
BC156451 AAI56452 Q9Y2I7 EC 2.7.1.150
BC172527 AAI72527    
AY457063 AAR19397 Q9Y2I7 EC 2.7.1.150
HQ447333 ADQ31819    
AB023198 BAA76825 Q9Y2I7 EC 2.7.1.150
AK091482 BAC03674 Q9Y2I7 EC 2.7.1.150
AK127769 BAC87123 Q6ZS32  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PIKFYVE NP_055855 R.norvegicus Pikfyve 316457   XP_237217 93
M.musculus Pikfyve 18711 Gene Info NP_035216 92
A.gambiae AgaP_AGAP005216 1274924   XP_314118 39
D.melanogaster CG33981 3885654   NP_611269 39
A.thaliana FAB1A 829460   NP_001190899 34
A.thaliana FAB1B 820647   NP_188044 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)