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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GTF2A1L, general transcription factor IIA, 1-like
Sequence ID:NM_001193487
NM_006872
NM_172196
Entrez Gene ID:11036
Ensembl ID:ENSG00000242441

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p16.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 48844998 - 48906746

 Exon Info From UCSC:
NM_001193487
NM_006872
NM_172196

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4826221Full LengthBC025991general transcription factor IIA, 1-like
5742182IncompleteBC064585general transcription factor IIA, 1-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006863  NP_758515  NP_006864  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001193487 NP_001180416    
NM_001198593 NP_001185522    
NM_001198594 NP_001185523    
NM_001198595 NP_001185524    
NM_006872 NP_006863 Q9UNN4 TFIIA
NM_006873 NP_006864 Q9Y6Q2 Adap_comp_sub
NM_172311 NP_758515 Q53S48 Adap_comp_sub
TFIIA

Related Sequences

 
mRNAGenPeptSwissProt
AF026169 AAD39617 Q9Y6Q2
Q9UNN4
AF106857 AAD39634 Q9UNN4
BC025991 AAH25991 Q9UNN4
BC064585 AAH64585 Q9UNN4
BC101772 AAI01773 Q3MIM1
BC101774 AAI01775 Q3MIM1
BC121063 AAI21064 Q0VAG8
BC121064 AAI21065 Q0VAG7
BC143520 AAI43521 B7ZL16
BC166659 AAI66659  
AY026319 AAK11719 Q9Y6Q2
AF255310 AAK57559 Q9Y6Q2
DQ891566 ABM82492  
DQ894756 ABM85682  
AK223350 BAD97070 Q9UNN4
AK314464 BAG37072 B2RB25
AK302220 BAG63576 Q9UNN4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GTF2A1L NP_006863 R.norvegicus Gtf2a1l 316711   NP_001012136 75
M.musculus Gtf2a1l 71828 Gene Info NP_076119 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)