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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PCF11, PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)
Sequence ID:BX440040
Entrez Gene ID:51585
Ensembl ID:ENSG00000165494

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, brain, cartilage, colon, eye, fetus, gastrointestinal tract, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, pancreas, pancreatic islet, peripheral nervous system, pooled tissue, skin, t-cell, testis, uncharacterized tissue, uterus, vascular
  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 82869422 - 82869921


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6043635Full LengthBC065384PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)
9007228Full LengthBC146778PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)
5529131IncompleteBC110432PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015885 NP_056969 O94913  

Related Sequences

 
mRNAGenPeptSwissProt
AF046935 AAC03107 O94913
BC065384 AAH65384 O94913
BC110432 AAI10433 Q0D2H7
BC146778 AAI46779 O94913
AB020631 BAA74847 O94913
AK302606 BAH13760 B7Z7X4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCF11 NP_056969 M.musculus Pcf11 74737 Gene Info NP_083354 94
R.norvegicus Pcf11 361605   XP_341884 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)