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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. ABCA5, ATP-binding cassette, sub-family A (ABC1), member 5
Sequence ID:NM_018672
Entrez Gene ID:23461
Ensembl ID:ENSG00000154265

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 67242790 - 67270149

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4723522IncompleteBC029426ATP-binding cassette, sub-family A (ABC1), member 5
4724012IncompleteBC070126ATP-binding cassette, sub-family A (ABC1), member 5
6620671IncompleteBC054480ATP-binding cassette, sub-family A (ABC1), member 5
100061705BC156256ATP-binding cassette, sub-family A (ABC1), member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_758424  NP_061142  

Protein Infomation

NM_018672 NP_061142 Q8WWZ7 ABC_tran
NM_172232 NP_758424   ABC_tran

Related Sequences

BC029426 AAH29426 Q05C38
BC156256 AAI56257 Q8WWZ7
AY028897 AAK30022 Q8WWZ7
AB067475 BAB67781 Q8WWZ7
AK056533 BAB71208 Q8WWZ7
AK058170 BAB71700 Q8WWZ7
AK292592 BAF85281 A8K977
AJ275973 CAB93535 Q8WWZ7
AJ512612 CAD54757 Q8WWZ7
BX640746 CAE45856 Q6N017

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens ABCA5 NP_061142 M.musculus Abca5 217265 Gene Info NP_671752 90
R.norvegicus Abca5 286970   NP_775429 90
A.gambiae AgaP_AGAP010416 1272631   XP_311532 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)