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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NAP1L4, nucleosome assembly protein 1-like 4
Sequence ID:NM_005969
Entrez Gene ID:4676
Ensembl ID:ENSG00000205531

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 2966837 - 3000450

 Exon Info From UCSC:
NM_005969

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3029455Full LengthBC022090nucleosome assembly protein 1-like 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005960  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005969 NP_005960 Q99733 NAP

Related Sequences

 
mRNAGenPeptSwissProt
U77456 AAC50870 Q99733
BC022090 AAH22090 Q99733
EU176734 ABW03535  
EU176389 ABW03840  
AB362575 BAF81540 A8CGI3
AK312599 BAG35491 B2R6J4
AK299515 BAG61467 B4DS05
AK316242 BAH14613 B7ZAC7
AK316324 BAH14695 B7ZAK9
AK316548 BAH14919 B7ZB83
AB500094 BAH95827 F5HFY4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NAP1L4 NP_005960 M.musculus Nap1l4 17955 Gene Info NP_032698 95
R.norvegicus Nap1l4 361684   NP_001012170 94
A.thaliana NAP1;1 828717   NP_194341 44
A.thaliana NAP1;3 835797   NP_568844 43
A.thaliana NAP1;2 816467   NP_001189553 43
S.pombe nap1 2539538   NP_587838 41
N.crassa NCU01438 3872145   XP_955998 39
S.cerevisiae NAP1 853922   NP_012974 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)