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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SETD6, SET domain containing 6
Sequence ID:NM_001160305
NM_024860
Entrez Gene ID:79918
Ensembl ID:ENSG00000103037

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 58549426 - 58553552

 Exon Info From UCSC:
NM_001160305
NM_024860

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4794299Full LengthBC022451SET domain containing 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079136  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001160305 NP_001153777 Q8TBK2  
NM_001265612 NP_001252541    
NM_016284 NP_057368 A5YKK6 Not1
NM_024860 NP_079136   SET
NM_206999 NP_996882    

Related Sequences

 
mRNAGenPeptSwissProt
AF110778 AAF14861 A5YKK6
BC000779 AAH00779 A5YKK6
BC022451 AAH22451 Q8TBK2
BC024317 AAH24317 A5YKK6
BC040523 AAH40523 A5YKK6
EF553522 ABQ66268 A5YKK6
AB023224 BAA76851 A5YKK6
AK024801 BAB15011 Q8TBK2
AK127136 BAC86845 Q6ZSV1
AK290495 BAF83184 Q8TBK2
AK056927 BAG51828 B3KPW6
AK092885 BAG52622 B3KS60
AK297288 BAG59758 B4DM46
AK300281 BAG62040 B4DTM8
AK302495 BAG63779 B4DYL7
AK304822 BAG65570 B4E3Q8
AK301092 BAH13408 B7Z6X2
AL117492 CAB55960 A5YKK6
BX537840 CAD97851 A5YKK6
CR749237 CAH18093 A5YKK6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SETD6 NP_079136 R.norvegicus Setd6 291844   NP_001099637 83
M.musculus Setd6 66083 Gene Info NP_001030295 82
N.crassa NCU09827 3874678   XP_958526 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)