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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SMUG1, Single-strand-selective monofunctional uracil-DNA glycosylase 1
Sequence ID:NM_014311
NM_001243787
NM_001243788
NM_001243789
NM_001243790
NM_001243791
Entrez Gene ID:23583
Ensembl ID:ENSG00000123415

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.11-q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 54575252 - 54577738

Transcript StartTranscript EndChromosomal Start Chromosomal End
111565457525154576406
115714605457743954577742
146115475458160254581688
154815705458273454582756

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961516Full LengthBC000417single-strand-selective monofunctional uracil-DNA glycosylase 1
6470294Full LengthBC088352single-strand-selective monofunctional uracil-DNA glycosylase 1
6724466Full LengthBC105607single-strand-selective monofunctional uracil-DNA glycosylase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055126  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243787 NP_001230716    
NM_001243788 NP_001230717    
NM_001243789 NP_001230718    
NM_001243790 NP_001230719    
NM_001243791 NP_001230720    
NM_014311 NP_055126 Q53HV7 UDG

Related Sequences

 
mRNAGenPeptSwissProt
AF125182 AAD17301 Q53HV7
BC000417 AAH00417 Q53HV7
BC088352 AAH88352 Q53HV7
BC105607 AAI05608 Q53HV7
AK001235 BAA91571 Q53HV7
AK091468 BAC03670 Q53HV7
AK222473 BAD96193 Q53HV7
AK290274 BAF82963 Q53HV7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SMUG1 NP_055126 M.musculus Smug1 71726 Gene Info NP_082161 90
R.norvegicus Smug1 315344   NP_808795 89
A.gambiae AgaP_AGAP002876 1273091   XP_312038 44
D.melanogaster CG5285 42078   NP_650609 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)