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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UPB1, Ureidopropionase, beta
Sequence ID:NM_016327
RefSeqGene ID:NG_012858
Entrez Gene ID:51733
Ensembl ID:ENSG00000100024

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 24891311 - 24922552

NM_016327 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12252489125024891474
2263972489607424896245
3984852489809324898180
4865802490671624906810
5817422490929124909452
7439122491116824911337
9139942491635424916435
99510372491795324917995
103811922491958624919740
119320662492167824922551

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40121343Full LengthBC131703ureidopropionase, beta
100000339Full LengthBC139840ureidopropionase, beta
4802810IncompleteBC033388ureidopropionase, beta
100000243IncompleteBC139843ureidopropionase, beta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057411  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_016327 NP_057411 Q9UBR1 EC 3.5.1.6 CN_hydrolase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF163312 AAF06735 Q9UBR1 EC 3.5.1.6
BC131703 AAI31704 Q9UBR1 EC 3.5.1.6
BC139840 AAI39841    
BC139843 AAI39844 A4QPH4  
AB013885 BAA88634 Q9UBR1 EC 3.5.1.6
AK314727 BAG37269 B2RBM2  
AK024277 BAG51283 B3KNC1  
CR456375 CAG30261 Q9UBR1 EC 3.5.1.6
CR627429 CAH10516 Q6AHZ8  
BX537493 CAI46015 Q5HYN3  
CU013080 CAK54511    
CU013368 CAK54810    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UPB1 NP_057411 M.musculus Upb1 103149 Gene Info NP_598756 86
R.norvegicus Upb1 116593   NP_446297 85
A.gambiae AgaP_AGAP010229 1279653   XP_319417 65
D.melanogaster pyd3 40916   NP_649732 64
C.elegans F13H8.7 174040   NP_495261 62
A.thaliana BETA-UP 836558   NP_201242 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)