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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RDH13, Retinol dehydrogenase 13 (all-trans/9-cis)
Sequence ID:AK096798
Entrez Gene ID:112724
Ensembl ID:ENSG00000160439

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.42Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 55550475 - 55554475


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3956119Full LengthBC009881retinol dehydrogenase 13 (all-trans/9-cis)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145971 NP_001139443 Q8NBN7  
NM_138412 NP_612421    

Related Sequences

 
mRNAGenPeptSwissProt
BC009881 AAH09881 Q8NBN7
AY358473 AAQ88837 Q8NBN7
AK075392 BAC11591 Q8NBN7
AK291579 BAF84268 A8K6B4
AK315539 BAG37918 B2RDH1
AK122764 BAG53715 B3KVA3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RDH13 NP_001139443 R.norvegicus Rdh13 361504   NP_001101938 87
M.musculus Rdh13 108841 Gene Info NP_780581 87
A.gambiae AgaP_AGAP005980 1276653   XP_316023 54
D.melanogaster CG30491 35704   NP_610306 52
A.thaliana AT5G02540 831913   NP_568102 43
A.thaliana AT2G37540 818330   NP_181290 43
N.crassa NCU08164 3875812   XP_959656 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)