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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. APOC4, apolipoprotein C-IV
Sequence ID:NM_001646
RefSeqGene ID:NG_008837
Entrez Gene ID:346
Ensembl ID:ENSG00000267467

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 45445530 - 45448751

NM_001646 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11164544549445445609
1172584544800545448146
2596134544839645448750

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4700462Full LengthBC020723apolipoprotein C-IV

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001646 NP_001637 P55056  

Related Sequences

 
mRNAGenPeptSwissProt
BC020723 AAH20723 P55056
EF371378 ABQ40075 A5YAK2
AK126257 BAG54298 P55056

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens APOC4 NP_001637 R.norvegicus Apoc4 680551   NP_001102889 60
M.musculus Apoc4 11425 Gene Info NP_031411 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)