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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PHOX2A, paired-like homeobox 2a
Sequence ID:NM_005169
RefSeqGene ID:NG_008169
Entrez Gene ID:401
Ensembl ID:ENSG00000165462

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
FIBROSIS OF EXTRAOCULAR MUSCLES, CONGENITAL, 2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 71950525 - 71955220

NM_005169 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1911397195012171951241
114013277195214571952332
132817167195483171955219

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5923445Full LengthBC041564paired-like homeobox 2a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005160  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005169 NP_005160 O14813 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC041564 AAH41564 O14813
EU446462 ABZ91991  
AK290645 BAF83334 O14813

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PHOX2A NP_005160 M.musculus Phox2a 11859 Gene Info NP_032913 98
R.norvegicus Phox2a 116648   NP_446321 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)