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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LAMTOR1, late endosomal/lysosomal adaptor, MAPK and MTOR activator 1
Sequence ID:NM_017907
RefSeqGene ID:NG_021423
Entrez Gene ID:55004
Ensembl ID:ENSG00000149357

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 71808410 - 71814323

NM_017907 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
216427180833871808959
6437697180933471809460
7708477180982671809903
8489937181015671810301
99411987181422871814432

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3544000Full LengthBC001706chromosome 11 open reading frame 59

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017907 NP_060377    

Related Sequences

 
mRNAGenPeptSwissProt
BC001706 AAH01706 Q6IAA8
AF289583 AAL55767 Q6IAA8
AK000632 BAA91297 Q6IAA8
AK300681 BAG62364 B4DUK2
CR457247 CAG33528 Q6IAA8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LAMTOR1 NP_060377 M.musculus 2400001E08Rik 66508 Gene Info NP_079881 99
R.norvegicus LOC100361543 100361543   XP_002730282 98
R.norvegicus Lamtor1 308869   NP_954533 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)