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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CTSL1, cathepsin L1
Sequence ID:NM_001257971
NM_001257972
NM_001257973
NM_001912
NM_145918
Entrez Gene ID:1514
Ensembl ID:ENSG00000135047

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 90341048 - 90346308

 Exon Info From UCSC:
NM_001912
NM_145918

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4295635Full LengthBC012612cathepsin L1
8860422Full LengthBC142983cathepsin L1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001903  NP_666023  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001257971 NP_001244900      
NM_001257972 NP_001244901      
NM_001257973 NP_001244902      
NM_001912 NP_001903 P07711 EC 3.4.22.15 Peptidase_C1
Inhibitor_I29
NM_145918 NP_666023 P07711 EC 3.4.22.15 Peptidase_C1
Inhibitor_I29

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF217997 AAG17239 Q9HBQ7  
BC012612 AAH12612 P07711 EC 3.4.22.15
BC142983 AAI42984 A5PLM9  
AF304301 AAM89516 Q8NG13  
AF467444 AAQ05021 Q5K630  
DQ892930 ABM83856    
DQ896179 ABM87178    
AK075100 BAG52066 B3KQK4  
X05256 CAA28877 P07711 EC 3.4.22.15
X12451 CAA30981 P07711 EC 3.4.22.15
Y18462 CAA77180 Q6LAF7  
BX537395 CAD97637 P07711 EC 3.4.22.15
CR457053 CAG33334 P07711 EC 3.4.22.15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTSL1 NP_001903 A.thaliana AT5G50260 835091   NP_568722 52
A.thaliana AT3G48350 823993   NP_566901 45
A.thaliana AT3G48340 823992   NP_680113 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)