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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. EFEMP2, EGF containing fibulin-like extracellular matrix protein 2
Sequence ID:NM_016938
NR_037718
RefSeqGene ID:NG_012304
Entrez Gene ID:30008
Ensembl ID:ENSG00000172638

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IAFBLN5
LOX

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 65634296 - 65640217

 Exon Info From UCSC:
NM_016938

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4182121Full LengthBC010456EGF-containing fibulin-like extracellular matrix protein 2
3610383IncompleteBC018871EGF-containing fibulin-like extracellular matrix protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058634  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016938 NP_058634 O95967 EGF
TIL
EGF_CA

Related Sequences

 
mRNAGenPeptSwissProt
AF093119 AAC62108 O95967
AF109121 AAF65188 O95967
AF124486 AAG45245 Q9H3D5
BC010456 AAH10456 O95967
AY358899 AAQ89258 O95967
DQ892047 ABM82973  
DQ895241 ABM86167  
AB030655 BAA92880 Q96TF5
AB209121 BAD92358 Q59GI8
AK292079 BAF84768 O95967
AK315181 BAG37622 B2RCM5
AK000980 BAG50843 O95967
AK075453 BAG52143 O95967
AJ132819 CAA10791 Q96TF5
O95967
CR541934 CAG46732 Q6FH22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EFEMP2 NP_058634 M.musculus Efemp2 58859 Gene Info NP_001157824 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)