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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CHST15, Carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
Sequence ID:NM_001270764
NM_015892
NM_001270765
NM_014863
RefSeqGene ID:NG_032891
Entrez Gene ID:51363
Ensembl ID:ENSG00000182022

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 125767219 - 125851908

Transcript StartTranscript EndChromosomal Start Chromosomal End
362705125767185125769854
27062853125771848125771995
28543010125780771125780927
30113167125798030125798186
31683314125801816125801962
33153654125804095125804434
36554713125805182125806240

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5204516Full LengthBC027908B cell RAG associated protein
5213653Full LengthBC075813B cell RAG associated protein
5741278Full LengthBC050540B cell RAG associated protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056976  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001270764 NP_001257693      
NM_001270765 NP_001257694      
NM_014863 NP_055678      
NM_015892 NP_056976 Q7LFX5 EC 2.8.2.33 Sulfotransfer_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF026477 AAC71691 Q7LFX5 EC 2.8.2.33
BC027908 AAH27908 Q7LFX5 EC 2.8.2.33
BC050540 AAH50540 Q7LFX5 EC 2.8.2.33
BC075813 AAH75813 Q7LFX5 EC 2.8.2.33
AB011170 BAA25524 Q7LFX5 EC 2.8.2.33
AB062423 BAB72145 Q7LFX5 EC 2.8.2.33
AK294961 BAG58035 B4DH74  
AK299546 BAG61492 B4DS30  
CR749804 CAH18664 Q7LFX5 EC 2.8.2.33

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHST15 NP_056976 M.musculus Chst15 77590 Gene Info NP_084211 93
R.norvegicus Chst15 286974   NP_775432 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)