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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. DDX39B, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
Sequence ID:NM_004640
Entrez Gene ID:7919
Ensembl ID:ENSG00000198563

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2964517Full LengthBC000361HLA-B associated transcript 1
3010263Full LengthBC013006HLA-B associated transcript 1

Protein Infomation

NM_004640 NP_004631 Q13838 EC DEAD
NM_080598 NP_542165 Q13838 EC DEAD

Related Sequences

BC000361 AAH00361 Q13838 EC
BC013006 AAH13006 Q13838 EC
BT009909 AAP88911 Q13838 EC
DQ891881 ABM82807    
DQ895067 ABM85993    
AB209217 BAD92454 Q59G92  
AK222912 BAD96632 Q13838 EC
AK294939 BAG58016 B4DH55  
AK295634 BAG58508 B4DIJ6  
AK295854 BAG58660 B4DIZ8  
AK298194 BAG60464 B4DP52  
AK316469 BAH14840 B4DIZ8  
Z37166 CAA85523 Q13838 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens DDX39B NP_004631 M.musculus Ddx39b 53817 Gene Info NP_062667 100
R.norvegicus Ddx39b 114612   NP_579834 100
D.melanogaster Hel25E 33781   NP_723089 86
A.gambiae AgaP_AGAP009075 1280031   XP_319825 85
S.pombe uap56 2542433   NP_594261 71
N.crassa NCU09076 3881069   XP_964893 67
S.cerevisiae SUB2 851475   NP_010199 66
P.falciparum UAP56 812689   XP_001349607 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)