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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TSC22D2, TSC22 domain family, member 2
Sequence ID:NM_014779
Entrez Gene ID:9819
Ensembl ID:ENSG00000196428

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 150126121 - 150177613

NM_014779 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12308150126787150129094
23092380150140835150140906
23812432150174862150174913
24333883150176162150177612

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5454441Full LengthBC044643TSC22 domain family, member 2
5170441IncompleteBC036355TSC22 domain family, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055594  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014779 NP_055594 O75157 TSC22

Related Sequences

 
mRNAGenPeptSwissProt
AF201290 AAG41223 O75157
AF201291 AAG41224 O75157
AF201292 AAG41225 O75157
BC044643 AAH44643 O75157
AB014569 BAA31644 O75157
AK297383 BAG59824 B4DMB2
AK297748 BAG60098 B4DN36

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TSC22D2 NP_055594 M.musculus Tsc22d2 72033 Gene Info NP_001074698 88
R.norvegicus Tsc22d2 499624   XP_574948 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)