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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NR1I2, nuclear receptor subfamily 1, group I, member 2
Sequence ID:NM_003889
NM_022002
NM_033013
RefSeqGene ID:NG_011856
Entrez Gene ID:8856
Ensembl ID:ENSG00000144852

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q12-q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 119526098 - 119536059

 Exon Info From UCSC:
NM_003889
NM_022002
NM_033013

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5087401Full LengthBC017304nuclear receptor subfamily 1, group I, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003880  NP_071285  NP_148934  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003889 NP_003880 O75469 Hormone_recep
zf-C4
NM_022002 NP_071285   Hormone_recep
zf-C4
NM_033013 NP_148934   Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
AF084644 AAC64557 O75469
AF084645 AAC64558 O75469
AF061056 AAD05436 O75469
BC017304 AAH17304 O75469
AY091855 AAM26736 O75469
HQ692837 ADZ17348 F1D8P9
HQ709177 ADZ17384 F1DAL3
AK122990 BAG53837 B3KVM5
AB307701 BAH02292 B6ZGT1
AJ009936 CAB55489 O75469
AJ009936 CAB55490 O75469
AJ009936 CAB55491 O75469
AJ009937 CAB55492 O75469
AJ009937 CAB55493 O75469
AJ009937 CAB55494 O75469

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NR1I2 NP_071285 M.musculus Nr1i2 18171 Gene Info NP_035066 77
R.norvegicus Nr1i2 84385   NP_443212 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta