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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIC1, hypermethylated in cancer 1
Sequence ID:NM_001098202
NM_006497
RefSeqGene ID:NG_027689
Entrez Gene ID:3090
Ensembl ID:ENSG00000177374

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 1957447 - 1960011

 Exon Info From UCSC:
NM_001098202
NM_006497

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063349Full LengthBC157027hypermethylated in cancer 1
5207336IncompleteBC030208hypermethylated in cancer 1
100061562BC156194hypermethylated in cancer 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006488  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001098202 NP_001091672 Q14526  
NM_006497 NP_006488   zf-C2H2
BTB

Related Sequences

 
mRNAGenPeptSwissProt
BC030208 AAH30208 A0PJI1
BC156194 AAI56195  
BC157027 AAI57028  
DQ187313 ABA60890 A0MA52
AJ550616 CAD79467 Q70SM2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIC1 NP_001091672 R.norvegicus Hic1 303310   NP_001100491 96
M.musculus Hic1 15248 Gene Info NP_034560 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta