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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RGPD1, RANBP2-like and GRIP domain containing 1
Sequence ID:NM_001024457
NM_001078170
Entrez Gene ID:400966
Ensembl ID:ENSG00000187627

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 161131259 - 161131709

 Exon Info From UCSC:
NM_001024457
NM_001078170

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069046Full LengthBC172352RANBP2-like and GRIP domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001019628  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001024457 NP_001019628 P0DJD0 TPR_1
Ran_BP1
GRIP
NM_001078170 NP_001071638 P0DJD1  

Related Sequences

 
mRNAGenPeptSwissProt
AF237700 AAF64155 Q9NYL8
BC172352 AAI72352  
AY354203 AAQ63888 P0DJD1
AK298885 BAG60998 B4DQN6
AK300276 BAG62036 B4DTM4
AK300352 BAG62094 B4DTT2
AK302429 BAG63732 B4DYH0
AK303443 BAG64489 B4E0M7
CR749330 CAH18184 P0DJD0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RGPD1 NP_001019628 H.sapiens RGPD2 729857 Gene Info NP_001071638 100
H.sapiens RGPD3 653489 Gene Info NP_001137485 96
H.sapiens RGPD4 285190 Gene Info NP_872394 96
H.sapiens RGPD8 727851 Gene Info NP_001157935 94
H.sapiens RGPD5 84220 Gene Info NP_005045 94
H.sapiens RGPD6 729540 Gene Info NP_001116835 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)