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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDE1C, phosphodiesterase 1C, calmodulin-dependent 70kDa
Sequence ID:NM_001191056
NM_001191057
NM_001191058
NM_001191059
NM_005020
Entrez Gene ID:5137
Ensembl ID:ENSG00000154678

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p14.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 31792631 - 32110461

 Exon Info From UCSC:
NM_001191056
NM_001191057
NM_001191058
NM_001191059
NM_005020

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4795158Full LengthBC022525phosphodiesterase 1C, calmodulin-dependent 70kDa
4795813Full LengthBC022479phosphodiesterase 1C, calmodulin-dependent 70kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005011  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001191056 NP_001177985      
NM_001191057 NP_001177986 Q14123 EC 3.1.4.17  
NM_001191058 NP_001177987      
NM_001191059 NP_001177988      
NM_005020 NP_005011     PDEase_I
PDEase_I_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U40372 AAA96961 Q14123 EC 3.1.4.17
U40371 AAC50437 Q14123 EC 3.1.4.17
BC022479 AAH22479 Q8TAE4  
BC022525 AAH22525 Q8TAE4  
DQ893643 ABM84569    
EU176511 ABW03312    
AK091734 BAC03734 Q14123 EC 3.1.4.17
AK056170 BAG51638 Q14123 EC 3.1.4.17
AK094180 BAG52838 B3KSS6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDE1C NP_001177987 M.musculus Pde1c 18575 Gene Info NP_001153425 95
R.norvegicus Pde1c 81742   NP_112340 95
C.elegans pde-1 173200   NP_493343 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)