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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. HIGD1A, HIG1 hypoxia inducible domain family, member 1A
Sequence ID:NM_001099668
NM_001099669
NM_014056
Entrez Gene ID:25994
Ensembl ID:ENSG00000181061

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 42825792 - 42845980

 Exon Info From UCSC:
NM_001099668
NM_001099669
NM_014056

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3346355Full LengthBC000601HIG1 domain family, member 1A
4093421Full LengthBC009583HIG1 domain family, member 1A
4109190Full LengthBC009594HIG1 domain family, member 1A
4686431Full LengthBC070277HIG1 domain family, member 1A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054775  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001099668 NP_001093138    
NM_001099669 NP_001093139    
NM_014056 NP_054775 Q9Y241 HIG_1_N

Related Sequences

 
mRNAGenPeptSwissProt
AF077034 AAD27767 Q9Y241
AF145385 AAD33954 Q9Y241
BC000601 AAH00601 Q9Y241
BC009583 AAH09583 Q9Y241
BC009594 AAH09594 Q9Y241
BC070277 AAH70277 Q9Y241
AK311815 BAG34758 B2R4G1
AL110233 CAB53686 Q9Y241
CR457385 CAG33666 Q9Y241
AM393830 CAL38705  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIGD1A NP_001093138 R.norvegicus LOC100361671 100361671   XP_002730318 80
M.musculus Gm14925 100503808   XP_003085313 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)