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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SEPT5, Septin 5
Sequence ID:NM_001009939
NM_002688
Entrez Gene ID:5413
Ensembl ID:ENSG00000184702

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 19705980 - 19710842


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4622405Full LengthBC025261septin 5
3884751IncompleteBC030503septin 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002679  NP_001009939  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001009939 NP_001009939   Septin
NM_002688 NP_002679 Q99719 Septin

Related Sequences

 
mRNAGenPeptSwissProt
L20860 AAA20398 P13224
U59632 AAB93436 Q7KYV2
U59632 AAB93437 P13224
U74628 AAB93438 Q99719
AF061154 AAC25958  
U85431 AAD00564 O95648
BC025261 AAH25261 Q99719
AK056273 BAB71133 Q99719
AB209168 BAD92405 Q59GE1
AK295940 BAG58724 B4DJ62
Y11593 CAA72332 Q99719
CR456545 CAG30431 Q99719
CU013145 CAK54576  
CU013433 CAK54875  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SEPT5 NP_002679 M.musculus Sept5 18951 Gene Info NP_998779 99
R.norvegicus Sept5 116728   NP_446383 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta