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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BCO2, beta-carotene oxygenase 2
Sequence ID:NM_001037290
NM_001256397
NM_001256398
NM_001256400
NM_031938
Entrez Gene ID:83875
Ensembl ID:ENSG00000197580

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q22.3-q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 112047122 - 112095422

 Exon Info From UCSC:
NM_001037290
NM_031938

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5175925Full LengthBC041656beta-carotene oxygenase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114144  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001037290 NP_001032367    
NM_001256397 NP_001243326    
NM_001256398 NP_001243327    
NM_001256400 NP_001243329    
NM_031938 NP_114144   RPE65

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC041656 AAH41656 Q8IUS0  
AF276432 AAK69433 Q9BYV7 EC 1.14.99.n2
AK027801 BAB55379 Q9BYV7 EC 1.14.99.n2
AK091783 BAC03747 Q8NAZ7  
AK315300 BAG37705 B2RCV8  
AK297853 BAG60185 B4DNC3  
AJ290393 CAC27994 Q9BYV7 EC 1.14.99.n2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BCO2 NP_114144 M.musculus Bco2 170752 Gene Info NP_573480 81
R.norvegicus Bco2 315644   NP_001121184 80
A.thaliana CCD8 829417   NP_195007 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)