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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CAPN10, calpain 10
Sequence ID:NM_023083
NM_023085
NM_021251
NM_023084
NM_023086
NM_023087
NM_023088
NM_023089
RefSeqGene ID:NG_011558
Entrez Gene ID:11132
Ensembl ID:ENSG00000142330

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DIABETES MELLITUS, NONINSULIN-DEPENDENT 1 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q37.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 241526228 - 241538514

 Exon Info From UCSC:
NM_023083
NM_023085
NM_021251
NM_023089

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2967328Full LengthBC007553calpain 10
3606959Full LengthBC004260calpain 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075571  NP_075573  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023083 NP_075571 Q9HC96 Peptidase_C2
Calpain_III
NM_023085 NP_075573   Peptidase_C2
Calpain_III

Related Sequences

 
mRNAGenPeptSwissProt
AF089088 AAG17966 Q9HC96
AF089090 AAG17968 Q9HC96
AF089091 AAG17969 Q9HC96
AF089092 AAG17970 Q9HC96
AF089093 AAG17971 Q9HC96
AF089094 AAG17972 Q9HC96
AF089096 AAG17974 Q9HC96
BC004260 AAH04260 Q9HC96
BC007553 AAH07553 Q9HC96
DQ893519 ABM84445  
DQ896503 ABM87502  
AB058748 BAB47474 Q9HC96
AK074807 BAC11220 Q9HC96
AK300279 BAH13249 B7Z6G3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CAPN10 NP_075571 M.musculus Capn10 23830 Gene Info NP_035926 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)