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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLX1B, SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)
Sequence ID:NM_024044
NM_178044
Entrez Gene ID:79008
Ensembl ID:ENSG00000181625

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 29465875 - 29469540

 Exon Info From UCSC:
NM_024044
NM_178044

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2823474Full LengthBC000754GIY-YIG domain containing 2
2823474Full LengthBC019306GIY-YIG domain containing 2
3452236Full LengthBC000803GIY-YIG domain containing 2
3503887Full LengthBC015990GIY-YIG domain containing 2
4335620Full LengthBC069007GIY-YIG domain containing 2
40146576Full LengthBC130545GIY-YIG domain containing 2
40146578Full LengthBC130547GIY-YIG domain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_835145  NP_076949  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024044 NP_076949 Q9BQ83 GIY-YIG
NM_178044 NP_835145   GIY-YIG

Related Sequences

 
mRNAGenPeptSwissProt
BC000754 AAH00754 Q9BQ83
BC000803 AAH00803 Q9BQ83
BC015990 AAH15990 Q9BQ83
BC019306 AAH19306 Q9BQ83
BC069007 AAH69007 Q9BQ83
BC130545 AAI30546 Q9BQ83
BC130547 AAI30548 Q9BQ83
AK027092 BAB15654 Q9H5H2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLX1B NP_076949 H.sapiens SLX1A 548593 Gene Info NP_001014999 100
M.musculus Slx1b 75764 Gene Info NP_083696 78
R.norvegicus Slx1b 293489   NP_001009292 76
A.gambiae AgaP_AGAP002259 1269300   XP_565552 49
D.melanogaster CG18271 40578   NP_649484 47
C.elegans F56A3.2 172157   NP_491541 42
S.pombe slx1 2541657   NP_593420 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)