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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATL2, atlastin GTPase 2
Sequence ID:NM_001135673
NM_022374
NR_024191
Entrez Gene ID:64225
Ensembl ID:ENSG00000119787

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 38523123 - 38604415

 Exon Info From UCSC:
NM_001135673
NM_022374

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6338889Full LengthBC053508atlastin GTPase 2
3450768IncompleteBC039050ADP-ribosylation factor-like 6 interacting protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071769  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135673 NP_001129145 Q8NHH9  
NM_022374 NP_071769   GBP

Related Sequences

 
mRNAGenPeptSwissProt
BC053508 AAH53508 Q8NHH9
AK026946 BAB15598 Q8NHH9
AK294049 BAH11658 Q8NHH9
AK294711 BAH11856 B7Z2H0
AK302621 BAH13764 B7Z7X8
AK303985 BAH14091 B7Z8V5
AK316179 BAH14550 B7ZA64

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATL2 NP_001129145 M.musculus Atl2 56298 Gene Info NP_062691 98
R.norvegicus Atl2 298757   NP_001094141 97
A.gambiae AgaP_AGAP002047 1281068   XP_321004 60
D.melanogaster atl 42934   NP_651274 58
C.elegans Y54G2A.2 177059   NP_001023492 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)