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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LY96, lymphocyte antigen 96
Sequence ID:NM_001195797
NM_015364
Entrez Gene ID:23643
Ensembl ID:ENSG00000154589

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q21.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 74903589 - 74941305

Transcript StartTranscript EndChromosomal Start Chromosomal End
12037490358674903788
2042937491703074917119
2944227492223574922363
4234757493902374939075
4765907494119074941304

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4767246Full LengthBC020690lymphocyte antigen 96

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056179  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001195797 NP_001182726    
NM_015364 NP_056179 Q9Y6Y9 E1_DerP2_DerF2

Related Sequences

 
mRNAGenPeptSwissProt
AF168121 AAF89635 Q9Y6Y9
BC020690 AAH20690 Q9Y6Y9
AB018549 BAA78717 Q9Y6Y9
AB446498 BAG55275 Q9Y6Y9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LY96 NP_056179 R.norvegicus Ly96 448830   NP_001019450 64
M.musculus Ly96 17087 Gene Info NP_058619 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)