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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SH3KBP1, SH3-domain kinase binding protein 1
Sequence ID:NM_001024666
NM_001184960
NM_031892
RefSeqGene ID:NG_021367
Entrez Gene ID:30011
Ensembl ID:ENSG00000147010

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22.1-p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 19553519 - 19905719

 Exon Info From UCSC:
NM_001024666
NM_001184960
NM_031892

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3906722Full LengthBC015806SH3-domain kinase binding protein 1
4421051IncompleteBC050663SH3-domain kinase binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001019837  NP_114098  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001024666 NP_001019837   SH3_1
NM_001184960 NP_001171889    
NM_031892 NP_114098 Q5JPT6
Q96B97
SH3_1

Related Sequences

 
mRNAGenPeptSwissProt
AF230904 AAF37854 Q5JPT6
Q96B97
BC015806 AAH15806 Q96B97
BC050663 AAH50663 Q96B97
AF329267 AAK95587 Q96B97
AF542051 AAN77231 Q96B97
AF329268 AAO13348 Q96B97
AY423734 AAS00497 Q5JPT6
Q96B97
AY542305 AAT08174 Q5JPT6
DQ892387 ABM83313  
DQ895600 ABM86526  
AK313308 BAG36113 Q5JPT6
AK293234 BAH11470 Q96B97
AK293237 BAH11471 B7Z1D5
AK300189 BAH13234 B7Z6E8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SH3KBP1 NP_114098 M.musculus Sh3kbp1 58194 Gene Info NP_001129199 94
R.norvegicus Sh3kbp1 84357   NP_445812 94
C.elegans Y44E3A.4 171906   NP_491143 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta