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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GPX3, glutathione peroxidase 3 (plasma)
Sequence ID:NM_002084
Entrez Gene ID:2878
Ensembl ID:ENSG00000211445

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 150400211 - 150407703

NM_002084 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1304150399998150400301
305458150404900150405053
459576150406460150406577
577676150406992150407091
6771760150407469150408552

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3882071Full LengthBC013601glutathione peroxidase 3 (plasma)
5738272Full LengthBC050378glutathione peroxidase 3 (plasma)
5748087Full LengthBC035841glutathione peroxidase 3 (plasma)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002075  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002084 NP_002075 P22352 EC 1.11.1.9 GSHPx

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF217787 AAF43005 P22352 EC 1.11.1.9
BC013601 AAH13601 P22352 EC 1.11.1.9
BC035841 AAH35841 P22352 EC 1.11.1.9
BC050378 AAH50378 P22352 EC 1.11.1.9
BC066949 AAH66949 Q6NXQ3  
D00632 BAA00525 P22352 EC 1.11.1.9
X58295 CAA41228 P22352 EC 1.11.1.9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPX3 NP_002075 R.norvegicus Gpx3 64317   NP_071970 91
M.musculus Gpx3 14778 Gene Info NP_001077398 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)