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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SFTPA1, surfactant protein A1
Sequence ID:NM_001093770
NM_001164644
NM_001164645
NM_001164646
NM_001164647
NM_005411
RefSeqGene ID:NG_021189
Entrez Gene ID:653509
Ensembl ID:ENSG00000122852

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PULMONARY FIBROSIS, IDIOPATHICELMOD2
MUC5B
SFTPA2
SFTPC
TERC
TERT

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

 Exon Info From UCSC:
NM_001093770
NM_001164644
NM_001164645
NM_001164646
NM_001164647
NM_005411

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001093770 NP_001087239    
NM_001164644 NP_001158116    
NM_001164645 NP_001158117    
NM_001164646 NP_001158118    
NM_001164647 NP_001158119    
NM_005411 NP_005402 Q8IWL2 Lectin_C
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
BC029913 AAH29913 Q8IWL2
BC111570 AAI11571 Q8IWL2
BC171875 AAI71875 Q8IWL2
HQ021433 ADO27676 Q8IWL2
HQ021434 ADO27677 Q8IWL2
HQ021435 ADO27678 Q8IWL2
HQ021436 ADO27679 Q8IWL2
HQ021437 ADO27680 Q8IWL2
HQ021438 ADO27681 Q8IWL2
HQ021439 ADO27682 Q8IWL2
HQ021440 ADO27683 Q8IWL2
HQ021441 ADO27684 Q8IWL2
HQ021442 ADO27685 Q8IWL2
AK290703 BAF83392 Q8IWL2
AK298002 BAG60308 B4DNP6
AK298029 BAG60331 B4DNR9
AK298034 BAG60335 B4DNS3
AK298092 BAG60377 B4DNW5
AK316196 BAH14567 B7Z4Y4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SFTPA1 NP_001087239 M.musculus Sftpa1 20387 Gene Info NP_075623 71
R.norvegicus Sftpa1 24773   NP_059025 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)