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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ALKBH3, alkB, alkylation repair homolog 3 (E. coli)
Sequence ID:NM_139178
Entrez Gene ID:221120
Ensembl ID:ENSG00000166199

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 43902396 - 43941813

NM_139178 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13734390235643902728
3745224390413243904280
5236264390463443904737
6276614390553243905566
6627094390815543908202
7108134391127443911377
8149024391359043913678
90311124392306543923274
111312114394058743940685
121215694394146743941824

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6176933Full LengthBC067257alkB, alkylation repair homolog 3 (E. coli)
40000372Full LengthBC103812alkB, alkylation repair homolog 3 (E. coli)
40000375Full LengthBC103813alkB, alkylation repair homolog 3 (E. coli)
40000376Full LengthBC103814alkB, alkylation repair homolog 3 (E. coli)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_139178 NP_631917 Q96Q83  

Related Sequences

 
mRNAGenPeptSwissProt
BC015155 AAH15155 Q96Q83
BC067257 AAH67257 Q96Q83
BC103812 AAI03813 Q96Q83
BC103813 AAI03814 Q96Q83
BC103814 AAI03815 Q96Q83
AB042029 BAB70508 Q96Q83

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ALKBH3 NP_631917 R.norvegicus Alkbh3 362169   NP_001014202 87
M.musculus Alkbh3 69113 Gene Info NP_081220 86
A.thaliana AT2G22260 816759   NP_565530 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)