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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LPP, LIM domain containing preferred translocation partner in lipoma
Sequence ID:NM_001167671
NM_001167672
NM_005578
RefSeqGene ID:NG_016932
Entrez Gene ID:4026
Ensembl ID:ENSG00000145012

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
LEUKEMIA, ACUTE MYELOGENOUSARHGEF12
CBFB
CEBPA
CHIC2
ETV6
FLT3
GATA2
GMPS
JAK2
KIT
MLF1
MLLT10
NPM1
NSD1
NUP214
PICALM
RUNX1
RUNX1
SH3GL1
TERT
WHSC1L1

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 188605359 - 188608459

 Exon Info From UCSC:
NM_001167671
NM_001167672
NM_005578

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052596Full LengthBC144076LIM domain containing preferred translocation partner in lipoma
40146615Full LengthBC130584LIM domain containing preferred translocation partner in lipoma

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005569  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001167671 NP_001161143    
NM_001167672 NP_001161144    
NM_005578 NP_005569 Q93052 LIM

Related Sequences

 
mRNAGenPeptSwissProt
U49957 AAC50738 Q93052
BC130584 AAI30585 Q93052
BC144076 AAI44077 B7ZLW0
AK302959 BAH13857 B7Z871
AK304035 BAH14096 B7Z8W0
CR457074 CAG33355 Q93052

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LPP NP_005569 M.musculus Lpp 210126 Gene Info NP_848780 90
R.norvegicus Lpp 288010   NP_001013886 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)