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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. EDEM2, ER degradation enhancer, mannosidase alpha-like 2
Sequence ID:NM_001145025
Entrez Gene ID:55741
Ensembl ID:ENSG00000088298

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q11.22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 33703166 - 33703703

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3051376Full LengthBC001371ER degradation enhancer, mannosidase alpha-like 2
4860424Full LengthBC016184ER degradation enhancer, mannosidase alpha-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060687  

Protein Infomation

NM_001145025 NP_001138497    
NM_018217 NP_060687 Q9BV94 Glyco_hydro_47

Related Sequences

BC001371 AAH01371 Q9BV94
BC016184 AAH16184 Q9BV94
AY358580 AAQ88943 Q9BV94
AK001645 BAA91806 Q9BV94
AK023931 BAB14731 Q9BV94
AK293583 BAG57052 B4DEE1
AK296878 BAG59440 B4DL78
AK298794 BAG60931 B4DQG9
AK300212 BAG61981 Q9BV94
AK303816 BAG64766 B4E1F4
CR457266 CAG33547 Q9BV94

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens EDEM2 NP_060687 R.norvegicus Edem2 296304   NP_001004230 95
M.musculus Edem2 108687 Gene Info NP_663512 94
A.gambiae AgaP_AGAP012463 4578501   XP_001231048 64
D.melanogaster Edem1 31154   NP_569959 59
C.elegans F10C2.5 179653   NP_506018 58
A.thaliana AT5G43710 834391   NP_199184 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)