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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AGTPBP1, ATP/GTP binding protein 1
Sequence ID:NM_015239
Entrez Gene ID:23287
Ensembl ID:ENSG00000135049

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 88161456 - 88356801

 Exon Info From UCSC:
NM_015239

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30344122Full LengthBC060815ATP/GTP binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056054  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015239 NP_056054   Peptidase_M14

Related Sequences

 
mRNAGenPeptSwissProt
BC060815 AAH60815 Q9UPW5
AB028958 BAA82987 Q9UPW5
AK001544 BAA91749 Q9UPW5
AK022562 BAB14100 Q9UPW5
AK023280 BAB14505 Q9UPW5
AK295304 BAG58284 B4DHX2
AK295774 BAG58598 Q9UPW5
AK299506 BAG61460 Q9UPW5
AJ437018 CAD24587 Q8TE37
BX648366 CAH56158 Q9UPW5
AL833359 CAH56222 Q9UPW5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AGTPBP1 NP_056054 M.musculus Agtpbp1 67269 Gene Info NP_075817 91
R.norvegicus Agtpbp1 290986   NP_001099570 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)