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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EXOSC7, exosome component 7
Sequence ID:NM_015004
NR_023353
Entrez Gene ID:23016
Ensembl ID:ENSG00000075914

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 45045283 - 45052962

NM_015004 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1864501774045017825
871884503063145030732
1892834503104145031135
2844494503857845038743
4505204504302945043099
5216444504678245046905
6458004504891145049066
80110364505272645052961

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3502185Full LengthBC012831exosome component 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055819  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015004 NP_055819 Q15024 RNase_PH
RNase_PH_C

Related Sequences

 
mRNAGenPeptSwissProt
BC012831 AAH12831 Q15024
D29958 BAA06226 Q15024
AK315741 BAG38096 B2RDZ9
AK295779 BAG58602 B4DIU0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EXOSC7 NP_055819 M.musculus Exosc7 66446 Gene Info NP_001074657 96
R.norvegicus Exosc7 316098   NP_001094195 96
A.gambiae AgaP_AGAP010483 1272607   XP_311461 54
D.melanogaster Rrp42 36766   NP_725517 49
A.thaliana AT3G07750 819966   NP_566318 40
C.elegans exos-7 180369   NP_508024 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)