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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL11, ribosomal protein L11
Sequence ID:NM_000975
NM_001199802
RefSeqGene ID:NG_011741
Entrez Gene ID:6135
Ensembl ID:ENSG00000142676

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
DIAMOND-BLACKFAN ANEMIA 7 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.1-p35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 24019097 - 24022909

Transcript StartTranscript EndChromosomal Start Chromosomal End
1262401829324018318
271772401909824019248
1782842402029624020402
2854162402114924021280
4175272402228724022397
5286072402283324022912

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4337066Full LengthBC018970ribosomal protein L11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000966  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000975 NP_000966 P62913
Q5VVD0
Ribosomal_L5
Ribosomal_L5_C
NM_001199802 NP_001186731    

Related Sequences

 
mRNAGenPeptSwissProt
L05092 AAC15856 P62913
Q5VVD0
BC018970 AAH18970 P62913
AF432212 AAL99919 P62913
AY871274 AAX11430 Q08ES8
DQ896712 ABM87711  
EU176409 ABW03860  
D28357 BAA05723  
AK311816 BAG34759 Q5VVD0
X79234 CAA55816 P62913

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL11 NP_000966 M.musculus Rpl11 67025 Gene Info NP_080195 100
R.norvegicus Rpl11 362631   NP_001020910 100
D.melanogaster RpL11 37235   NP_477054 85
C.elegans rpl-11.2 180535   NP_508413 82
C.elegans rpl-11.1 178778   NP_504008 82
A.gambiae AgaP_AGAP011173 1270757   XP_309477 81
S.pombe rpl1101 2541591   NP_594150 74
S.pombe rpl1102 2539846   NP_595899 74
A.thaliana RPL16A 818874   NP_850376 72
A.thaliana RPL16B 827607   NP_567563 72
A.thaliana AT5G45775 834617   NP_568649 72
S.cerevisiae RPL11B 852976   NP_011599 72
A.thaliana AT3G58700 825039   NP_191429 72
S.cerevisiae RPL11A 856217   NP_015427 72
N.crassa NCU02509 3881790   XP_965640 72
P.falciparum PF07_0079 2655123   XP_001349097 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)