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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RDH11, Retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
Sequence ID:NM_016026
NM_001252650
Entrez Gene ID:51109
Ensembl ID:ENSG00000072042

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 68144109 - 68159568

Transcript StartTranscript EndChromosomal Start Chromosomal End
2416436814352068145139
164418336815173168151920
183420436815692868157137
204421486815785668157960
214923046815915468159309
230524236815965068159768
242425876816234668162509

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3504920Full LengthBC000112retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
3533223Full LengthBC051291retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
4135182Full LengthBC011727retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
4250934Full LengthBC026274retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
5261204Full LengthBC037302retinol dehydrogenase 11 (all-trans/9-cis/11-cis)

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001252650 NP_001239579      
NM_016026 NP_057110 Q8TC12 EC 1.1.1.300  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF151840 AAD34077 Q8TC12 EC 1.1.1.300
AF167438 AAF89632 Q8TC12 EC 1.1.1.300
BC000112 AAH00112 Q8TC12 EC 1.1.1.300
BC011727 AAH11727 Q8TC12 EC 1.1.1.300
BC026274 AAH26274 Q8TC12 EC 1.1.1.300
BC037302 AAH37302 Q8TC12 EC 1.1.1.300
BC051291 AAH51291 Q8TC12 EC 1.1.1.300
AF395068 AAK72049 Q8TC12 EC 1.1.1.300
DQ426886 ABD90542 Q0QD40  
HQ447163 ADQ31650    
AB209223 BAD92460 Q59G86  
AK289427 BAF82116 Q8TC12 EC 1.1.1.300
AK314465 BAG37073 Q8TC12 EC 1.1.1.300
AK057195 BAG51881 B3KQ19  
AK074749 BAG51997 Q8TC12 EC 1.1.1.300
AK293355 BAG56871 B4DDW0  
CR457180 CAG33461 Q8TC12 EC 1.1.1.300

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RDH11 NP_057110 M.musculus Rdh11 17252 Gene Info NP_067532 86
R.norvegicus Rdh11 362757   NP_001012193 84
A.gambiae AgaP_AGAP007572 1269657   XP_308302 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)