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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CHRNA5, cholinergic receptor, nicotinic, alpha 5 (neuronal)
Sequence ID:NM_000745
RefSeqGene ID:NG_023328
Entrez Gene ID:1138
Ensembl ID:ENSG00000169684

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
LUNG CANCER SUSCEPTIBILITY 2CHRNA3

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 78881464 - 78883618

NM_000745 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13067885786178858166
3074587887315278873303
4595037887898678879030
5046137888065578880764
61414457888214678882977
144636227888543378887609

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5501542Full LengthBC033639cholinergic receptor, nicotinic, alpha 5
6189913IncompleteBC050469cholinergic receptor, nicotinic, alpha 5

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000745 NP_000736 P30532 Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
M83712 AAA58357 P30532
U62434 AAB40112 P30532
BC033639 AAH33639 P30532
DQ893355 ABM84281  
DQ896674 ABM87673  
EU176798 ABW03599  
Y08419 CAA69696 P30532
AJ584705 CAE48367 Q6EWN4
AJ584706 CAE48368 Q6EWN4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHRNA5 NP_000736 M.musculus Chrna5 110835 Gene Info NP_789814 91
R.norvegicus Chrna5 25102   NP_058774 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)