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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PBX2, pre-B-cell leukemia homeobox 2
Sequence ID:NM_002586
Entrez Gene ID:5089
Ensembl ID:ENSG00000204304

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, brain, cerebrum, embryonic tissue, endocrine, eye, fetus, kidney, lung, lymph node, lymphoreticular, mammary gland, nervous, pancreas, pancreatic islet, pineal gland, placenta, pooled tissue, skin, soft tissue, testis, thymus, uncharacterized tissue, uterus
  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_002586 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1917603215250932154250
176118473215438032154466
184819363215458932154677
193720903215501832155171
209122263215542332155558
222724173215574232155932
241826653215603332156280
266627393215649932156572
274032313215747132157962

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6425904Full LengthBC082261pre-B-cell leukemia homeobox 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002586 NP_002577 P40425 Homeobox
PBC

Related Sequences

 
mRNAGenPeptSwissProt
BC082261 AAH82261 P40425
BT009823 AAP88825 Q7KZE5
HQ447575 ADQ32061  
X59842 CAA42503 P40425

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PBX2 NP_002577 M.musculus Pbx2 18515 Gene Info NP_059491 98
R.norvegicus Pbx2 406164   NP_001002828 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)