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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MRPS7, mitochondrial ribosomal protein S7
Sequence ID:NM_015971
Entrez Gene ID:51081
Ensembl ID:ENSG00000125445

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 73257799 - 73262139

NM_015971 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13167325774873258063
3175087325857773258768
5095727325888473258947
5737407325942073259587
74114147326178273262455

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3350465Full LengthBC000241mitochondrial ribosomal protein S7
6150671IncompleteBC050641mitochondrial ribosomal protein S7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057055  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015971 NP_057055 Q9Y2R9 Ribosomal_S7

Related Sequences

 
mRNAGenPeptSwissProt
AF077042 AAD27775 Q9Y2R9
BC000241 AAH00241 Q9Y2R9
JF432776 ADZ15993  
AK222995 BAD96715 Q9Y2R9
AK313854 BAG36582 Q9Y2R9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPS7 NP_057055 M.musculus Mrps7 50529 Gene Info NP_079581 85
R.norvegicus Mrps7 113958   XP_213513 85
A.gambiae AgaP_AGAP009613 1278987   XP_318643 49
D.melanogaster mRpS7 34412   NP_523537 43
C.elegans Y57G11C.34 190379   NP_502782 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)