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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BCCIP, BRCA2 and CDKN1A interacting protein
Sequence ID:NM_016567
NM_078468
NM_078469
RefSeqGene ID:NG_029095
Entrez Gene ID:56647
Ensembl ID:ENSG00000107949

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 127512114 - 127542090

 Exon Info From UCSC:
NM_016567
NM_078468
NM_078469

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4277458Full LengthBC009771BRCA2 and CDKN1A interacting protein

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016567 NP_057651    
NM_078468 NP_510868 Q9P287  
NM_078469 NP_510869    

Related Sequences

 
mRNAGenPeptSwissProt
BC009771 AAH09771 Q9P287
AY064248 AAL55439 Q9P287
AY064249 AAL55440 Q9P287
AB040450 BAA92927 Q9P287
AB040451 BAA92928 Q9P287
AK055691 BAG51557 Q9P287
AK300767 BAG62432 B4DUS0
AK304529 BAG65330 B4E318
AL834458 CAD39118 Q9P287

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BCCIP NP_510868 M.musculus Bccip 66165 Gene Info NP_079668 79
R.norvegicus Bccip 361666   NP_001101975 68
A.gambiae AgaP_AGAP003476 1272848   XP_311766 36
D.melanogaster CG9286 41690   NP_650317 36
A.thaliana AT2G44510 819058   NP_566018 30
S.cerevisiae BCP1 851963   NP_010648 30
S.pombe SPCC613.08 2538703   NP_587696 30
N.crassa NCU07726 3878124   XP_961976 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)