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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAG2, recombination activating gene 2
Sequence ID:NM_000536
NM_001243785
NM_001243786
NR_033666
RefSeqGene ID:NG_007573
Entrez Gene ID:5897
Ensembl ID:ENSG00000175097

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
COMBINED CELLULAR AND HUMORAL IMMUNE DEFECTS WITH GRANULOMASRAG1
RAG1
OMENN SYNDROMEDCLRE1C
RAG1
RAG1
SEVERE COMBINED IMMUNODEFICIENCY, B CELL-NEGATIVERAG1
RAG1

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 36613987 - 36614459

Transcript StartTranscript EndChromosomal Start Chromosomal End
2922793661349436615744
228024573661965136619828

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4656700Full LengthBC022397recombination activating gene 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000527  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000536 NP_000527 P55895 RAG2
NM_001243785 NP_001230714    
NM_001243786 NP_001230715    

Related Sequences

 
mRNAGenPeptSwissProt
AF080577 AAC35287 Q71UK1
BC022397 AAH22397 P55895
DQ892012 ABM82938  
DQ895201 ABM86127  
AK292664 BAF85353 P55895

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAG2 NP_000527 R.norvegicus Rag2 295953   NP_001093998 89
M.musculus Rag2 19374 Gene Info NP_033046 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)