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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. LDB2, LIM domain binding 2
Sequence ID:NM_001130834
Entrez Gene ID:9079
Ensembl ID:ENSG00000169744

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:4p16Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 16503166 - 16900217

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4693654Full LengthBC034019LIM domain binding 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001281  

Protein Infomation

NM_001130834 NP_001124306    
NM_001290 NP_001281 O43679 LIM_bind

Related Sequences

AF052389 AAC13274 O43679
AF064492 AAC28342 O43679
AF064493 AAC28343 O43679
AF068651 AAC77817 O43679
AF047337 AAC83552 O43679
BC034019 AAH34019 O43679
DQ891981 ABM82907  
DQ895171 ABM86097  
AK294588 BAH11819 B7Z2D3
AK300119 BAH13216 B7Z6D0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens LDB2 NP_001281 M.musculus Ldb2 16826 Gene Info NP_034828 98
R.norvegicus Ldb2 289664   NP_001099479 98
A.gambiae AgaP_AGAP004691 1278566   XP_318175 75
D.melanogaster Chi 37837   NP_726403 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)