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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NBPF1, Neuroblastoma breakpoint family, member 1
Sequence ID:NM_001039703
NM_015383
NM_001037675
Entrez Gene ID:55672

Database Links

UniGeneEntrez GeneOMIMHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 16888925 - 16912034

 Exon Info From UCSC:
NM_001039703
NM_015383
NM_001037675

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3925652IncompleteBC010124neuroblastoma breakpoint family, member 1
5529875IncompleteBC110431neuroblastoma breakpoint family, member 1
9093245IncompleteBC169316hypothetical protein FLJ20719
9093246IncompleteBC169317hypothetical protein FLJ20719
9093261IncompleteBC169318hypothetical protein FLJ20719
30717917IncompleteBC094705neuroblastoma breakpoint family, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056198  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001037675 NP_001032764 Q3BBV1  
NM_001039703 NP_001034792    
NM_001102663 NP_001096133    
NM_015383 NP_056198 Q5TI25 DUF1220
NM_017940 NP_060410 Q3BBV0  

Related Sequences

 
mRNAGenPeptSwissProt
AF161426 AAF28986 Q9P074
BC034418 AAH34418 Q3BBV0
BC063799 AAH63799 Q6P3W6
BC094705 AAH94705 Q4VC10
BC148331 AAI48332  
BC167783 AAI67783  
BC169316 AAI69316  
BC169317 AAI69317  
BC169318 AAI69318  
AF379613 AAO15387 Q8IX86
AF379616 AAO15388 Q8IX85
AF379619 AAO15389 Q8IU90
AF379620 AAO15390 Q8IU90
AF379622 AAO15391 Q8IX84
AF379623 AAO15392 Q8IX83
AF379624 AAO15393 Q8IX82
AF379626 AAO15394 Q8IX81
AF379627 AAO15395 Q8IX80
AF379628 AAO15396 Q8IX79
AF379631 AAO15399 Q5TI25
AF379632 AAO15400 Q8IX75
AF379633 AAO15401 Q8IX74
AF379636 AAO15402 Q8IX73
AF380580 AAO15403 Q8IX72
AF380581 AAO15404 Q8IX71
AF380582 AAO15405 Q8IX70
AF419616 AAO15442 Q8IX62
AY894565 AAX85104 Q3BBW0
AY894574 AAX85113 Q3BBV1
AY894575 AAX85114 Q3BBV0
JF432685 ADZ15902  
AK000726 BAA91343 Q6P3W6
AB051480 BAB21784 Q3BBV0
AK294414 BAG57664 B4DG53
AK294944 BAG58020 B4DH59
AK299612 BAG61540 B4DS78
AK295639 BAH12136 B7Z3A0
AL117237 CAB55305 Q5TI25
XM_003960946 XP_003960995  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NBPF1 NP_060410 H.sapiens NBPF15 284565 Gene Info NP_001164226 95
H.sapiens NBPF16 728936   NP_001096133 95
H.sapiens NBPF9 400818   NP_001032764 94
H.sapiens NBPF12 149013   XP_003119193 94
H.sapiens LOC100506032 100506032 Gene Info XP_003119173 93
H.sapiens NBPF14 25832 Gene Info NP_056198 93
H.sapiens NBPF11 200030 Gene Info NP_899228 91
H.sapiens NBPF24 728912 Gene Info NP_001095133 91
H.sapiens NBPF10 100132406   NP_001034792 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)