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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SERP1, stress-associated endoplasmic reticulum protein 1
Sequence ID:NM_014445
Entrez Gene ID:27230
Ensembl ID:ENSG00000120742

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 150262005 - 150264135

NM_014445 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112515150259780150262284
25162591150263489150263564
25923181150263838150264427

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6502670Full LengthBC108314stress-associated endoplasmic reticulum protein 1
40053721Full LengthBC112364stress-associated endoplasmic reticulum protein 1
40053726Full LengthBC112365stress-associated endoplasmic reticulum protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055260  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014445 NP_055260 Q9Y6X1 RAMP4

Related Sequences

 
mRNAGenPeptSwissProt
AF136975 AAG49436 Q9Y6X1
BC108314 AAI08315 Q9Y6X1
BC112364 AAI12365 Q9Y6X1
BC112365 AAI12366 Q9Y6X1
AB022427 BAA81895 Q9Y6X1
AL136807 CAB66741 Q9Y6X1
CR533472 CAG38503 Q9Y6X1
AM392789 CAL37667  
AM393259 CAL38137  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SERP1 NP_055260 M.musculus Serp1 28146 Gene Info NP_109610 100
R.norvegicus Serp1 80881   NP_110462 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)