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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATG10, Autophagy related 10
Sequence ID:NM_001131028
NM_031482
Entrez Gene ID:83734
Ensembl ID:ENSG00000152348

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q14.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 81267975 - 81443315

 Exon Info From UCSC:
NM_001131028
NM_031482

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4521833Full LengthBC029268ATG10 autophagy related 10 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_113670  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001131028 NP_001124500    
NM_031482 NP_113670 Q9H0Y0 Autophagy_C

Related Sequences

 
mRNAGenPeptSwissProt
BC029268 AAH29268 Q9H0Y0
AF318326 AAL55833 Q9H0Y0
DQ892432 ABM83358  
DQ895644 ABM86570  
AK024016 BAB14778 Q9H0Y0
AK315752 BAG38106 Q9H0Y0
AL136912 CAB66846 Q9H0Y0
AM393858 CAL38733  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATG10 NP_113670 M.musculus Atg10 66795 Gene Info NP_080046 82
R.norvegicus Atg10 688555   NP_001102975 79
A.thaliana ATG10 819941   NP_850533 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)