Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZMAT5, Zinc finger, matrin-type 5
Sequence ID:NM_019103
NM_001003692
Entrez Gene ID:55954
Ensembl ID:ENSG00000100319

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22cen-q12.3

Chromosomal Position (from UCSC)

Chromosomal Position:22: 30126776 - 30162950

 Exon Info From UCSC:
NM_019103
NM_001003692

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3890730Full LengthBC009717zinc finger, matrin type 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001003692  NP_061976  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001003692 NP_001003692 Q9UDW3 zf-CCCH
zf-U1
NM_019103 NP_061976 Q9UDW3 zf-CCCH
zf-U1

Related Sequences

 
mRNAGenPeptSwissProt
BC009717 AAH09717 Q9UDW3
EU831881 ACE86640  
EU831804 ACE87322  
AK292671 BAF85360 Q9UDW3
AL160311 CAB77284 Q9UDW3
CR456353 CAG30239 Q9UDW3
CR457393 CAG33674 Q9UDW3
CU013063 CAK54494  
CU013351 CAK54793  
BK005198 DAA05496 Q9UDW3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZMAT5 NP_001003692 M.musculus Zmat5 67178 Gene Info NP_080291 93
R.norvegicus Zmat5 501926   XP_577351 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)