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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RBM22, RNA binding motif protein 22
Sequence ID:NM_018047
Entrez Gene ID:55696
Ensembl ID:ENSG00000086589

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q33.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 150070355 - 150080624

 Exon Info From UCSC:
NM_018047

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3449258Full LengthBC003402RNA binding motif protein 22

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060517  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018047 NP_060517 Q9NW64 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC003402 AAH03402 Q9NW64
AK001152 BAA91521 Q9NW64
AK297019 BAG59551 Q9NW64
AL136933 CAB66867 Q9NW64
AM393639 CAL38515  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RBM22 NP_060517 M.musculus Rbm22 66810 Gene Info NP_080052 100
R.norvegicus Rbm22 307410   NP_001020847 100
A.gambiae AgaP_AGAP004509 1274655   XP_313808 67
D.melanogaster CG14641 40529   NP_649440 64
C.elegans T11G6.8 177979   NP_502014 56
A.thaliana AT2G29580 817507   NP_180518 54
A.thaliana AT1G07360 837248   NP_563788 51
N.crassa NCU03007 3881543   XP_965393 37
S.pombe cwf5 2538974   NP_588094 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)